Perturbation of m6AWriters Reveals Two Distinct Classes of mRNA Methylation at Internal and 50 Sites

نویسندگان

  • Schraga Schwartz
  • Maxwell R. Mumbach
  • Marko Jovanovic
  • Tim Wang
  • Karolina Maciag
  • G. Guy Bushkin
  • Dmitry Ter-Ovanesyan
  • Naomi Habib
  • Davide Cacchiarelli
  • Neville E. Sanjana
  • Elizaveta Freinkman
  • Michael E. Pacold
  • Rahul Satija
  • Tarjei S. Mikkelsen
  • Nir Hacohen
  • Feng Zhang
  • Steven A. Carr
  • Eric S. Lander
چکیده

Schraga Schwartz,1,12 Maxwell R. Mumbach,1,12 Marko Jovanovic,1 Tim Wang,1,2,3 Karolina Maciag,1,4 G. Guy Bushkin,2 PhilippMertins,1 Dmitry Ter-Ovanesyan,1 Naomi Habib,1 Davide Cacchiarelli,1,5 Neville E. Sanjana,1 Elizaveta Freinkman,2 Michael E. Pacold,2,6 Rahul Satija,1 Tarjei S. Mikkelsen,1,5 Nir Hacohen,1,7 Feng Zhang,1,8,9 Steven A. Carr,1 Eric S. Lander,1,3,10,* and Aviv Regev1,3,11,* 1Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA 2Whitehead Institute for Biomedical Research, Cambridge, MA 02142, USA 3Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 4Graduate Program in Immunology, Division of Medical Sciences, Harvard Medical School, Boston, MA 02115, USA 5Harvard Stem Cell Institute and Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA 6Department of Radiation Oncology, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, MA 02215, USA 7Center for Immunology and Inflammatory Diseases, Massachusetts General Hospital, Charlestown, MA 02129, USA 8McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 9Department of Brain and Cognitive Sciences and Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 10Department of Systems Biology, Harvard Medical School, Boston, MA 02114, USA 11Howard Hughes Medical Institute, 4000 Jones Bridge Road, Chevy Chase, MD 20815, USA 12Co-first author *Correspondence: [email protected] (E.S.L.), [email protected] (A.R.) http://dx.doi.org/10.1016/j.celrep.2014.05.048 This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/).

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites.

N6-methyladenosine (m6A) is a common modification of mRNA with potential roles in fine-tuning the RNA life cycle. Here, we identify a dense network of proteins interacting with METTL3, a component of the methyltransferase complex, and show that three of them (WTAP, METTL14, and KIAA1429) are required for methylation. Monitoring m6A levels upon WTAP depletion allowed the definition of accurate a...

متن کامل

Methylation and mRNA expression levels of P15, death-associated protein kinase, and suppressor of cytokine signaling-1 genes in multiple myeloma

Objective(s): The aim of this study was to investigate the methylation status and mRNA expression levels of P15, death-associated protein kinase (DAPK), and suppressor of cytokine signaling-1 (SOCS1) genes in multiple myeloma (MM). Materials and Methods: The bone marrow samples of 54 MM patients were collected and the methylation status of the P15, DAPK, and SOCS1 gene promoter regions was dete...

متن کامل

Pattern of DNA cytosine methylation in Aeluropus littoralis during temperature stress

DNA methylation as an epigenetic mediator plays the important role in spatial and temporal gene regulation and ensures the stability and the plasticity of organism. In this investigation, methylation sensitive amplification polymorphism (MSAP) were assessed in CCGG sites on a halophytic plant, Aeluropuslittoralis in response to different temperature stresses including freezing...

متن کامل

Involvement of Cytosine DNA methylation in different developmental stages of Aeluropus littoralis

DNA methylation as epigenetic mark plays a key role in normal differential and developmental processes as well as in dynamic gene regulation at the genomic level. To assess DNA methylation pattern in different developmental stages of Aeluropus littoralis, methylation sensitive amplified polymorphism (MSAP) was used. Methylation and demethylation status at the CCGG recognition site were...

متن کامل

Profiling of 2′-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity

Ribose methylation is one of the two most abundant modifications in human ribosomal RNA and is believed to be important for ribosome biogenesis, mRNA selectivity and translational fidelity. We have applied RiboMeth-seq to rRNA from HeLa cells for ribosome-wide, quantitative mapping of 2'-O-Me sites and obtained a comprehensive set of 106 sites, including two novel sites, and with plausible box ...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2014